BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005B09LP1|AL425335
(490 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1780 782 0.0
>3x_Contig1780
Length = 27883
Score = 782 bits (393), Expect = 0.0
Identities = 466/490 (95%), Gaps = 1/490 (0%)
Strand = Plus / Plus
Query: 1 ttcatttccatcatcactgtcatcattttcttgcatttcctcaaaatcatcgcgaaggtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19993 ttcatttccatcatcactgtcatcattttcttgcatttcctcaaaatcatcgcgaaggtc 20052
Query: 61 attgaaatttattgaatccacagagcccacttccgaaacgtcatctggaaacatatttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20053 attgaaatttattgaatccacagagcccacttccgaaacgtcatctggaaacatatttct 20112
Query: 121 cccacattcagcggagtcttcctcctccgattcttcgtcgtcatctaacggcgtctcttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20113 cccacattcagcggagtcttcctcctccgattcttcgtcgtcatctaacggcgtctcttc 20172
Query: 181 ctcatcttgtgaaccttctccctctatttcgtgctcagcatattgggttgtcaaatataa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20173 ctcatcttgtgaaccttctccctctatttcgtgctcagcatattgggttgtcaaatataa 20232
Query: 241 atcgtgattaccattttgtaatttgtctatkaaatcatgaaacttcatgaacactctttt 300
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 20233 atcgtgattaccattttgtaatttgtctataaaatcatgaaacttcatgaacactctttt 20292
Query: 301 gctgcccgatccgcctccaccgtttgctttctgctctctttgccacacttccttatctaa 360
|||||| |||||| ||||||||||| |||||||||| ||||| ||||||| ||||||||
Sbjct: 20293 gctgccagatccgaatccaccgtttgatttctgctctatttgcaacacttcattatctaa 20352
Query: 361 cgtttctttgatattttccggtttccacaagattcccattgasatctttagatgcctgnt 420
|||||||||||||||||||||||| || |||||||| ||||| ||||||||||||||| |
Sbjct: 20353 cgtttctttgatattttccggttt-caaaagattccaattgaaatctttagatgcctgat 20411
Query: 421 tccctttccacggcttcctcttcttcccctaattctccaaamagtcttcccttccttcct 480
| ||| |||||||||||||||||| | |||||||| ||| ||||||| ||||||| |
Sbjct: 20412 taaatttacacggcttcctcttcttcacataattctcaaaaaagtcttcaattccttcat 20471
Query: 481 ttgttgtcgg 490
||||||||||
Sbjct: 20472 ttgttgtcgg 20481
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3909
Number of Sequences: 1807
Number of extensions: 3909
Number of successful extensions: 103
Number of sequences better than 1.0e-20: 1
length of query: 490
length of database: 10,358,551
effective HSP length: 16
effective length of query: 474
effective length of database: 10,329,639
effective search space: 4896248886
effective search space used: 4896248886
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)